Index

A

applyBoundaries() (in module gns.samplers)

applyBoundary() (in module gns.nested_sampler) (in module gns.samplers)

C

calc1mt() (in module gns.calculations) (in module gns.nested_sampler) calc1mt2() (in module gns.calculations) (in module gns.nested_sampler) calcEofftArr() (in module gns.calculations) (in module gns.nested_sampler) calcEofLogZ() (in module gns.calculations) (in module gns.nested_sampler) calcEofLogZII() (in module gns.calculations) calcEofts() (in module gns.calculations) (in module gns.nested_sampler) calcEofZ() (in module gns.nested_sampler) calcEofZ2FinalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZ2FinalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZ2Keeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZ2KeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZFinalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZFinalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZII() (in module gns.calculations) calcEofZKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZZFinalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcEofZZFinalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcHErr() (in module gns.nested_sampler) (in module gns.theoretical_funcs) calcHKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcHKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcHKeetonLog2() (in module gns.keeton_calculations) calcHSkillingK() (in module gns.calculations) (in module gns.nested_sampler) calcHTheor() (in module gns.nested_sampler) (in module gns.theoretical_funcs) calcHTheorApprox() (in module gns.nested_sampler) (in module gns.theoretical_funcs) calcHTotalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcHTotalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcHTotalKeetonLog2() (in module gns.keeton_calculations) calcInitTrialSig() (in module gns.nested_sampler) (in module gns.samplers) calcInnerLogSums() (in module gns.keeton_calculations) calcInnerSums() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcLogEofts() (in module gns.calculations) (in module gns.nested_sampler) calcLogSums() (in module gns.keeton_calculations)

calcLogSumsLoop() (in module gns.keeton_calculations) calcLogVarZSkillingK() (in module gns.calculations) calcSums() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcSumsLoop() (in module gns.keeton_calculations) (in module gns.nested_sampler) calct() (in module gns.calculations) (in module gns.nested_sampler) calct2() (in module gns.calculations) (in module gns.nested_sampler) calcTrialLhood() (in module gns.samplers) calcVariance() (in module gns.calculations) (in module gns.nested_sampler) calcVarianceLog() (in module gns.calculations) (in module gns.nested_sampler) calcVarLogZ() (in module gns.calculations) (in module gns.nested_sampler) calcVarLogZII() (in module gns.calculations) calcVarLogZSkilling() (in module gns.calculations) (in module gns.nested_sampler) calcVarZ() (in module gns.nested_sampler) calcVarZII() (in module gns.calculations) calcVarZSkillingK() (in module gns.calculations) (in module gns.nested_sampler) calcZMomentsFinalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcZMomentsFinalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcZMomentsKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcZMomentsKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) calcZTheor() (in module gns.nested_sampler) (in module gns.theoretical_funcs) calcZTheorApprox() (in module gns.nested_sampler) (in module gns.theoretical_funcs) callGetDist() (in module gns.nested_sampler) (in module gns.plotting) cartCirc2Point() (in module gns.geom) cartesian_from_spherical() (in module gns.prob_funcs) cartesianFromSpherical() (in module gns.geom) cartSphere2Point() (in module gns.geom) cartTorus2Point() (in module gns.geom) cCalc() (gns.prob_funcs.KentDistribution method) checkBoundaries() (in module gns.nested_sampler) checkBoundary() (in module gns.samplers) checkCircleBounds() (in module gns.geom_sampler) checkIfAveragedLhood() (in module gns.nested_sampler) (in module gns.ns_end_funcs) checkInputParamsShape() (in module gns.array_checks) (in module gns.nested_sampler) checkinvPriorShape() (in module gns.array_checks) checkLhoodShape() (in module gns.array_checks) checkSphereBounds() (in module gns.geom_sampler) checkTargSupShape() (in module gns.array_checks) checkTorusBounds() (in module gns.geom_sampler) clipChains() (in module gns.input) cornerPlots() (in module gns.plotting) cube2numpyArr() (in module gns.mn_run)

E

Eoft2OverEoftPowi() (in module gns.calculations) (in module gns.nested_sampler) Eoft2Powi() (in module gns.calculations) (in module gns.nested_sampler) EoftPowi() (in module gns.calculations) (in module gns.nested_sampler)

evalExpLogIntegrand() (in module gns.nested_sampler) (in module gns.theoretical_funcs) evalIntegrand() (in module gns.nested_sampler) (in module gns.theoretical_funcs) evalLogLExpLogIntegrand() (in module gns.nested_sampler) (in module gns.theoretical_funcs)

F

fitLhood() (in module gns.nested_sampler) (in module gns.prob_funcs)

fitLhoods() (gns.prob_funcs.LhoodObjs method) fitPriors() (in module gns.nested_sampler) (in module gns.prob_funcs)

G

get2DMarg() (in module gns.plotting) get3DMarg() (in module gns.plotting) get4DMarg() (in module gns.plotting) get5DMarg() (in module gns.plotting) getCartesianCoords() (in module gns.geom_sampler) getCartesianSigma() (in module gns.geom_sampler) getCircleCartSigma() (in module gns.geom_sampler) getCircleSigma() (in module gns.geom_sampler) getCircleTrial() (in module gns.geom_sampler) GetDistPlotterTheor() (in module gns.plotting) getEofftArr() (in module gns.calculations) (in module gns.nested_sampler) getEofWeightsLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getEofwLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getEofZ2TotalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) getEofZ2TotalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) getEofZLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getEofZTotalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) getEofZTotalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) getFinalAverage() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getFinalContribution() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getFinalContributionLog() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getFinalMax() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getFromSummary() (in module gns.input) getFromTxt() (in module gns.input) getGeomParams() (in module gns.geom_sampler) getGeomSigma() (in module gns.geom_sampler) getGeomTrialPoint() (in module gns.geom_sampler) getLivePointsPhysFinal() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getLogEofWeight() (in module gns.calculations) (in module gns.nested_sampler) getLogEofWeightsLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getLogEofwLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getLogEofXLogEofw() (in module gns.calculations) (in module gns.nested_sampler) getLogEofZLive() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getMaxLhood() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) getNewLiveBlind() (in module gns.nested_sampler) (in module gns.samplers) getNewLiveMH() (in module gns.nested_sampler) (in module gns.samplers) getNonGeomLimits() (in module gns.geom_sampler) getNonGeomParams() (in module gns.geom_sampler)

getNonGeomSigma() (in module gns.geom_sampler) getPiSigma() (in module gns.geom_sampler) getPoleOrthogs() (in module gns.geom) getPoleVec() (in module gns.geom) getPriorIntegrandAndLimits() (in module gns.nested_sampler) (in module gns.theoretical_funcs) getPriorLogPdfs() (in module gns.nested_sampler) (in module gns.prob_funcs) getPriorPdfs() (in module gns.nested_sampler) (in module gns.prob_funcs) getPriorPpfs() (in module gns.nested_sampler) (in module gns.prob_funcs) getRandOrthogs() (in module gns.geom) getSetupDicts() (in module gns.setup_dicts) getShapeLimits() (in module gns.geom_sampler) getShapeParams() (in module gns.geom_sampler) getShapeSigma() (in module gns.geom_sampler) getSphereCartSigma() (in module gns.geom_sampler) getSphereSigma() (in module gns.geom_sampler) getSphereTrial() (in module gns.geom_sampler) getTargetSupport() (in module gns.toy_models) getTorusCartSigma() (in module gns.geom_sampler) getTorusSigma() (in module gns.geom_sampler) getTorusTrial() (in module gns.geom_sampler) getTotal() (in module gns.nested_sampler) (in module gns.ns_end_funcs) getToyFuncs() (in module gns.toy_models) getToyHypers() (in module gns.toy_models) getToyHypersGen() (in module gns.toy_models) getToyHypersGeom() (in module gns.toy_models) getToyObjects() (in module gns.toy_models) getToyProbFuncs() (in module gns.toy_models) getTwoPiSigma() (in module gns.geom_sampler) getVarTotalKeeton() (in module gns.keeton_calculations) (in module gns.nested_sampler) getVarTotalKeetonLog() (in module gns.keeton_calculations) (in module gns.nested_sampler) gns (module) gns.array_checks (module) gns.calculations (module) gns.geom (module) gns.geom_plots (module) gns.geom_sampler (module) gns.input (module) gns.keeton_calculations (module) gns.mn_run (module) gns.nested_run (module) gns.nested_sampler (module) gns.ns_end_funcs (module) gns.ns_loop_funcs (module) gns.output (module) gns.plotting (module) gns.prob_funcs (module) gns.recurrence_calculations (module) gns.samplers (module) gns.setup_dicts (module) gns.theoretical_funcs (module) gns.tools (module) gns.toy_models (module)

I

infinite_sum() (in module gns.prob_funcs) integrateLogFunc() (in module gns.theoretical_funcs)

invPrior() (gns.prob_funcs.priorObjs method) (in module gns.nested_sampler) (in module gns.prob_funcs)

K

KentDistribution (class in gns.prob_funcs)

KentDistributionSum (class in gns.prob_funcs)

L

Lhood() (in module gns.nested_sampler) (in module gns.prob_funcs) LhoodObjs (class in gns.prob_funcs) LLhood() (in module gns.nested_sampler) (in module gns.prob_funcs) logAddArr() (in module gns.nested_sampler) (in module gns.tools) logAddArr2() (in module gns.nested_sampler) (in module gns.tools) logAddArr3() (in module gns.tools)

logAddExp() (in module gns.tools) logpdf() (gns.prob_funcs.KentDistribution method) (gns.prob_funcs.KentDistributionSum method) (gns.prob_funcs.LhoodObjs method) logPriorFuncsSum() (gns.prob_funcs.priorObjs method) (in module gns.prob_funcs) logSubArr2() (in module gns.tools) logSubArr3() (in module gns.tools) logsubexp() (in module gns.nested_sampler) logSubExp() (in module gns.tools)

M

main() (in module gns.nested_sampler) MNRun() (in module gns.mn_run) MNRun2() (in module gns.mn_run)

modToDomainReflect() (in module gns.nested_sampler) (in module gns.samplers) modToDomainWrap() (in module gns.nested_sampler) (in module gns.samplers)

N

nDIntegratorHTheor() (in module gns.nested_sampler) (in module gns.theoretical_funcs) nDIntegratorZTheor() (in module gns.nested_sampler) (in module gns.theoretical_funcs) NestedRun() (in module gns.nested_run) (in module gns.nested_sampler)

NestedRunLinear() (in module gns.nested_run) (in module gns.nested_sampler) NestedRunLog() (in module gns.nested_run) numpyArr2Cube() (in module gns.mn_run)

P

pdf() (gns.prob_funcs.KentDistribution method) (gns.prob_funcs.KentDistributionSum method) (gns.prob_funcs.LhoodObjs method) physPeriod2Pi() (in module gns.geom) physPeriod2TwoPi() (in module gns.geom) pickTrial() (in module gns.samplers) piPeriod2Phys() (in module gns.geom) plotCircle() (in module gns.geom_plots) plotLhood() (in module gns.plotting) plotPhysPosteriorIW() (in module gns.nested_sampler) (in module gns.plotting) plotSphere() (in module gns.geom_plots) plotSphericalKDE() (in module gns.plotting) plotTorus() (in module gns.geom_plots) plotXPosterior() (in module gns.nested_sampler) (in module gns.plotting) point2CartCirc() (in module gns.geom) point2CartSphere() (in module gns.geom) point2CartTorus() (in module gns.geom) printBreak() (in module gns.nested_sampler) (in module gns.output)

printFinalLivePoints() (in module gns.nested_sampler) (in module gns.output) printSampleNum() (in module gns.nested_sampler) (in module gns.output) printTerminationUpdateInfo() (in module gns.nested_sampler) (in module gns.output) printTerminationUpdateZ() (in module gns.nested_sampler) (in module gns.output) printTheoretical() (in module gns.nested_sampler) (in module gns.output) printUpdate() (in module gns.nested_sampler) (in module gns.output) printZHValues() (in module gns.nested_sampler) (in module gns.output) priorFuncsProd() (gns.prob_funcs.priorObjs method) (in module gns.nested_sampler) (in module gns.prob_funcs) priorObjs (class in gns.prob_funcs) projectCart2Circ() (in module gns.geom) projectCart2Sphere() (in module gns.geom) projectCart2Torus() (in module gns.geom)

R

recombineTrialPoint() (in module gns.geom_sampler) rectifyLigoParamNames() (in module gns.output)

rectifyShapeParamNames() (in module gns.output) rodriguezRot() (in module gns.geom)

S

sphericalTranslation() (in module gns.geom) splitGeomParams() (in module gns.geom_sampler)

splitGeomShapes() (in module gns.geom_sampler) switchPolarSys() (in module gns.geom) switchTorusSys() (in module gns.geom)

T

testCircleProposalSymmetry() (in module gns.geom) testOrthog() (in module gns.geom) testSphereProposalSymmetry() (in module gns.geom) testTorusProposalSymmetry() (in module gns.geom) testTrial() (in module gns.nested_sampler) (in module gns.samplers)

translateAxes() (in module gns.geom) translateAxis() (in module gns.geom) tryTermination() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) tryTerminationLog() (in module gns.nested_sampler) (in module gns.ns_loop_funcs) twoPiPeriod2Phys() (in module gns.geom)

U

updateEofX() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofX2() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofX2Final() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofXFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofZ() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofZ2() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofZ2Final() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofZFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateEofZX() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateH() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateHLog() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofX() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofX2() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofX2Final() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofXFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations)

updateLogEofZ() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofZ2() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofZ2Final() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofZFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogEofZX() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogZnXM() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogZnXMoments() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogZnXMomentsF() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateLogZnXMomentsFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateTrialSigma() (in module gns.nested_sampler) (in module gns.samplers) updateZnXM() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateZnXMoments() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateZnXMomentsF() (in module gns.nested_sampler) (in module gns.recurrence_calculations) updateZnXMomentsFinal() (in module gns.nested_sampler) (in module gns.recurrence_calculations)

W

writeOutput() (in module gns.nested_sampler) (in module gns.output) writeParamNames() (in module gns.output) writeRanges() (in module gns.output)

writeSummary() (in module gns.output) writeTheoreticalSamples() (in module gns.output) writeTheorZ() (in module gns.output) writeTxt() (in module gns.output)

Z

ZTheorException, [1]